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## catGenes
- [`abbrevGen()`](/reference/abbrevGen.qmd)
- [`alignSeqs()`](/reference/alignSeqs.qmd)
- [`catfullGenes()`](/reference/catfullGenes.qmd)
- [`catmultGenes()`](/reference/catmultGenes.qmd)
- [`combineFASTA()`](/reference/combineFASTA.qmd)
- [`convertAlign()`](/reference/convertAlign.qmd)
- [`dropSeq()`](/reference/dropSeq.qmd)
- [`evomodelCmds()`](/reference/evomodelCmds.qmd)
- [`evomodelTest()`](/reference/evomodelTest.qmd)
- [`fastadframe()`](/reference/fastadframe.qmd)
- [`mineMitochondrion()`](/reference/mineMitochondrion.qmd)
- [`minePlastome()`](/reference/minePlastome.qmd)
- [`mineSeq()`](/reference/mineSeq.qmd)
- [`mineTaxa()`](/reference/mineTaxa.qmd)
- [`mrbayesRun()`](/reference/mrbayesRun.qmd)
- [`mrbayesStop()`](/reference/mrbayesStop.qmd)
- [`nexusdframe()`](/reference/nexusdframe.qmd)
- [`phylipdframe()`](/reference/phylipdframe.qmd)
- [`plotPhylo()`](/reference/plotPhylo.qmd)
- [`run_catGenes()`](/reference/run_catGenes.qmd)
- [`splitTips()`](/reference/splitTips.qmd)
- [`writeNexus()`](/reference/writeNexus.qmd)
- [`writePhylip()`](/reference/writePhylip.qmd)